Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121913483
rs121913483
0.710 GeneticVariation BEFREE PIK3CA showed a uniquely high rate of mutations within the helicase domain, and FGFR3 contained a predominance of hotspot S249C alterations that were not found in HPV- HNSCC. 30933315

2019

dbSNP: rs1695
rs1695
0.050 GeneticVariation BEFREE GSTM1, GSTT1 and GSTP1 Ile105Val polymorphisms in outcomes of head and neck squamous cell carcinoma patients treated with cisplatin chemoradiation. 31249357

2019

dbSNP: rs17568
rs17568
0.010 GeneticVariation BEFREE Association of OX40 gene polymorphisms (rs17568G/A and rs229811A/C) with head and neck squamous cell carcinoma. 30923998

2019

dbSNP: rs229811
rs229811
0.010 GeneticVariation BEFREE Association of OX40 gene polymorphisms (rs17568G/A and rs229811A/C) with head and neck squamous cell carcinoma. 30923998

2019

dbSNP: rs121912656
rs121912656
0.710 GeneticVariation BEFREE We show here that overexpression of the GOF mutant p53 G245D and other GOF p53 mutants enhances the invasive cell growth of p53-deficient head and neck squamous cell carcinoma (HNSCC) UM-SCC-1 cells both in in vitro three-dimensional culture and in an in vivo orthotopic nude mouse model of HNSCC through a novel transcription-independent mechanism. 29269868

2018

dbSNP: rs1799782
rs1799782
0.060 GeneticVariation BEFREE We evaluated the correlation of the x-ray repair cross complementing gene 1 (XRCC1) Arg194Trp polymorphism with clinical outcomes in head and neck squamous cell carcinoma (HNSCC) patients treated with concurrent chemoradiation therapy (CCRT). 29893275

2018

dbSNP: rs1052133
rs1052133
0.040 GeneticVariation BEFREE Our meta-analysis results indicated that <i>hOGG1</i> Ser326Cys polymorphism may be associated with increased risk of HNSCC, especially in Caucasians, alcohol drinkers and the patients with laryngeal squamous cell carcinoma. 29560133

2018

dbSNP: rs11016879
rs11016879
0.010 GeneticVariation BEFREE The MGMT rs11016879 AG genotype and A allele were associated with increased HNSCC risk. 29370316

2018

dbSNP: rs12917
rs12917
0.010 GeneticVariation BEFREE Our results indicated that the MGMT rs12917 TT genotype increases the risk of HNSCC. 29370316

2018

dbSNP: rs2273535
rs2273535
0.010 GeneticVariation BEFREE The Aurora-Kinase A Phe31-Ile polymorphism as possible predictor of response to treatment in head and neck squamous cell carcinoma. 29560108

2018

dbSNP: rs26537
rs26537
0.010 GeneticVariation BEFREE Finally, we identified that rs26537 of ATG12 (additive model: adjusted odds ratio [OR] = 1.19, 95% confidence interval [CI] = 1.03-1.37, P = 0.017) and rs4663402 in ATG16L1 (additive model: adjusted OR = 1.39, 95%CI = 1.08-1.80, P = 0.010) were significantly associated with the increased risk of HNSCC. 29637616

2018

dbSNP: rs4663402
rs4663402
0.010 GeneticVariation BEFREE Finally, we identified that rs26537 of ATG12 (additive model: adjusted odds ratio [OR] = 1.19, 95% confidence interval [CI] = 1.03-1.37, P = 0.017) and rs4663402 in ATG16L1 (additive model: adjusted OR = 1.39, 95%CI = 1.08-1.80, P = 0.010) were significantly associated with the increased risk of HNSCC. 29637616

2018

dbSNP: rs4759314
rs4759314
0.010 GeneticVariation BEFREE HOTAIR rs4759314 may influence HNSCC susceptibility and serve as a diagnostic biomarker. 29461598

2018

dbSNP: rs7958904
rs7958904
0.010 GeneticVariation BEFREE However, there were no significant associations of rs874945 and rs7958904 with HNSCC risk. 29461598

2018

dbSNP: rs874945
rs874945
0.010 GeneticVariation BEFREE However, there were no significant associations of rs874945 and rs7958904 with HNSCC risk. 29461598

2018

dbSNP: rs9350
rs9350
0.010 GeneticVariation BEFREE This prospective study aimed to investigate whether <i>MLH1</i> c.-93G>A (rs1800734), <i>MSH2</i> c.211+9C>G (rs2303426), <i>MSH3</i> c.3133G>A (rs26279), <i>EXO1</i> c.1765G>A (rs1047840), and <i>EXO1</i> c.2270C>T (rs9350) single nucleotide polymorphisms (SNPs) of the mismatch repair (MMR) pathway change side effects and response rate of 90 HNSCC patients treated with CDDP and RT. 30038702

2018

dbSNP: rs2910164
rs2910164
0.050 GeneticVariation BEFREE In summary, variant alleles of miR-146a rs2910164 alleles may have an association with the increased risk of SCCHN in Chinese patients, and these associations differed based on tumor site. 29049342

2017

dbSNP: rs13181
rs13181
0.030 GeneticVariation BEFREE This study aimed to investigate the associations of XPC c.2815A>C, XPD c.934G>A and c.2251A>C, XPF c.2505T>C and ERCC1 c.354C>T single nucleotide polymorphisms (SNPs) of nucleotide excision repair pathway in outcome of head and neck squamous cell carcinoma (HNSCC) patients treated with cisplatin (CDDP) chemoradiation. 26918827

2017

dbSNP: rs1034220998
rs1034220998
0.010 GeneticVariation BEFREE This study aimed to investigate the associations of XPC c.2815A>C, XPD c.934G>A and c.2251A>C, XPF c.2505T>C and ERCC1 c.354C>T single nucleotide polymorphisms (SNPs) of nucleotide excision repair pathway in outcome of head and neck squamous cell carcinoma (HNSCC) patients treated with cisplatin (CDDP) chemoradiation. 26918827

2017

dbSNP: rs11615
rs11615
0.010 GeneticVariation BEFREE This study aimed to investigate the associations of XPC c.2815A>C, XPD c.934G>A and c.2251A>C, XPF c.2505T>C and ERCC1 c.354C>T single nucleotide polymorphisms (SNPs) of nucleotide excision repair pathway in outcome of head and neck squamous cell carcinoma (HNSCC) patients treated with cisplatin (CDDP) chemoradiation. 26918827

2017

dbSNP: rs121434569
rs121434569
0.010 GeneticVariation BEFREE Higher frequency of EGFR-TK domain mutations together with the presence of the T790M mutation suggests that identification of these mutations might streamline the therapy and provide a better prognosis in HNSCC cases. 28352186

2017

dbSNP: rs1256743514
rs1256743514
0.010 GeneticVariation BEFREE The mutational analysis in the eight HNSCC cell lines revealed an <i>EGFR</i> mutation (p.H773Y) and gene amplification in the HN13 cells. 28881811

2017

dbSNP: rs17084687
rs17084687
KIT
0.010 GeneticVariation BEFREE Furthermore, interaction analyses revealed a significant multiplicative interaction between rs17084687 and drinking on HNSCC risk (P = 0.012). 27186940

2017

dbSNP: rs1799793
rs1799793
0.010 GeneticVariation BEFREE XPD c.934G>A polymorphism of nucleotide excision repair pathway in outcome of head and neck squamous cell carcinoma patients treated with cisplatin chemoradiation. 26918827

2017

dbSNP: rs1799801
rs1799801
0.010 GeneticVariation BEFREE This study aimed to investigate the associations of XPC c.2815A>C, XPD c.934G>A and c.2251A>C, XPF c.2505T>C and ERCC1 c.354C>T single nucleotide polymorphisms (SNPs) of nucleotide excision repair pathway in outcome of head and neck squamous cell carcinoma (HNSCC) patients treated with cisplatin (CDDP) chemoradiation. 26918827

2017